{ "_id": "6a1f2476b401979e73420daf", "Package": "wildlifeDI", "Type": "Package", "Title": "Calculate Indices of Dynamic Interaction for Wildlife Tracking\nData", "Version": "1.0.1", "Authors@R": "person(given=\"Jed\", \nfamily=\"Long\",\nrole=c(\"aut\",\"cre\",\"cph\"),\nemail=\"jed.long@uwo.ca\",\ncomment = c(ORCID = \"0000-0002-2815-0399\"))", "Description": "Dynamic interaction refers to spatial-temporal\nassociations in the movements of two (or more) animals. This\npackage provides tools for calculating a suite of indices used\nfor quantifying dynamic interaction with wildlife telemetry\ndata. For more information on each of the methods employed see\nthe references within. The package (as of version >= 0.3) also\nhas new tools for automating contact analysis in large tracking\ndatasets. The package (as of version 1.0) uses the 'move2'\nclass of objects for working with tracking dataset.", "URL": "https://github.com/jedalong/wildlifeDI", "License": "GPL-3", "VignetteBuilder": "knitr", "RoxygenNote": "7.3.1", "Encoding": "UTF-8", "Config/pak/sysreqs": "libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev\nlibssl-dev libproj-dev libsqlite3-dev libudunits2-dev", "Repository": "https://jedalong.r-universe.dev", "Date/Publication": "2025-03-19 13:28:18 UTC", "RemoteUrl": "https://github.com/jedalong/wildlifedi", "RemoteRef": "HEAD", "RemoteSha": "f9a1abde21d286cf2585cc57e83632ab239899d0", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-16 06:34:47 UTC", "User": "root" }, "Author": "Jed Long [aut, cre, cph] (ORCID:\n)", "Maintainer": "Jed Long ", "MD5sum": "aa96b3d47f0f9ce804199ba5cad078ba", "_user": "jedalong", "_type": "src", "_file": "wildlifeDI_1.0.1.tar.gz", "_fileid": "3a07c79a3cfca6361d23d231a9ba6d5ab85d88cd5df37a6b209ea047e4b8cc2a", "_filesize": 1899713, "_sha256": "3a07c79a3cfca6361d23d231a9ba6d5ab85d88cd5df37a6b209ea047e4b8cc2a", "_created": "2026-05-16T06:34:47.000Z", "_published": "2026-06-02T18:44:06.855Z", "_distro": "noble", "_jobs": [ { "job": 79146258322, "time": 183, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7031245270" }, { "job": 79146258989, "time": 164, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7031243254" }, { "job": 79146258207, "time": 107, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7031266889" }, { "job": 79146258169, "time": 108, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7031251827" }, { "job": 79146257597, "time": 297, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7031227059" }, { "job": 79146257528, "time": 128, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7366800470" }, { "job": 79146258319, "time": 122, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7031239431" }, { "job": 79146258789, "time": 105, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7031237765" }, { "job": 79146258174, "time": 112, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7031238368" } ], "_buildurl": "https://github.com/r-universe/jedalong/actions/runs/25955027840", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/jedalong/wildlifedi", "_commit": { "id": "f9a1abde21d286cf2585cc57e83632ab239899d0", "author": "Jed Long ", "committer": "Jed Long ", "message": "Cran Submission\n", "time": 1742390898 }, "_maintainer": { "name": "Jed Long", "email": "jed.long@uwo.ca", "login": "jedalong", "twitter": "@jedalong", "uuid": 7062177, "orcid": "0000-0002-2815-0399" }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "move2", "role": "Imports" }, { "package": "adehabitatLT", "role": "Imports" }, { "package": "sp", "role": "Imports" }, { "package": "sf", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "graphics", "role": "Imports" }, { "package": "dplyr", "role": "Imports" }, { "package": "units", "role": "Imports" }, { "package": "lwgeom", "role": "Imports" }, { "package": "ggplot2", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "igraph", "role": "Suggests" } ], "_owner": "jedalong", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 17, "_contributors": [ { "user": "jedalong", "count": 44, "uuid": 7062177 }, { "user": "mattk-16", "count": 3, "uuid": 116367795 } ], "_userbio": { "uuid": 7062177, "type": "user", "name": "Jed Long", "description": "\r\n Associate Professor, Department of Geography & Environment, GIS, movement, GPS tracking, spatial analysis\r\n" }, "_downloads": { "count": 695, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/wildlifeDI" }, "_mentions": 2, "_devurl": "https://github.com/jedalong/wildlifedi", "_searchresults": 33, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "extra/wildlifeDI.html", "manual.pdf" ], "_homeurl": "https://github.com/jedalong/wildlifedi", "_realowner": "jedalong", "_cranurl": true, "_releases": [ { "version": "0.1", "date": "2014-08-18" }, { "version": "0.2", "date": "2014-12-15" }, { "version": "0.3.0", "date": "2019-04-13" }, { "version": "0.4.0", "date": "2021-03-04" }, { "version": "0.4.1", "date": "2021-06-16" }, { "version": "0.5.0", "date": "2022-10-01" }, { "version": "0.5.1", "date": "2023-11-13" }, { "version": "1.0.0", "date": "2024-03-22" }, { "version": "1.0.1", "date": "2025-03-22" } ], "_exports": [ "Ca", "checkTO", "conDisplacement", "conPhase", "conProcess", "conTimelag", "Cr", "Cs", "dcPlot", "DI", "Don", "GetSimultaneous", "GetTO", "HAI", "IAB", "Lixn", "ltraj_move2", "move2_ltraj", "Prox" ], "_datasets": [ { "name": "deer", "title": "GPS tracking data of two male deer", "object": "deer", "file": "deer.rdata", "class": [ "move2", "sf", "data.frame" ], "fields": [ "date", "id", "geometry" ], "rows": 1118, "table": true, "tojson": true }, { "name": "does", "title": "GPS tracking data of female white-tailed deer", "object": "does", "file": "does.RData", "class": [ "move2", "sf", "data.frame" ], "fields": [ "date", "id", "Elev", "Slope", "pForest", "dPond", "dRoads", "geometry" ], "rows": 10364, "table": true, "tojson": true } ], "_help": [ { "page": "Ca", "title": "Coefficient of Association", "topics": [ "Ca" ] }, { "page": "checkTO", "title": "Check for temporal overlap", "topics": [ "checkTO" ] }, { "page": "conDisplacement", "title": "Calculate net displacement from contacts", "topics": [ "conDisplacement" ] }, { "page": "conPhase", "title": "Process contact phases", "topics": [ "conPhase" ] }, { "page": "conProcess", "title": "Process contacts", "topics": [ "conProcess" ] }, { "page": "conTimelag", "title": "Compute time-lags from contact phases", "topics": [ "conTimelag" ] }, { "page": "Cr", "title": "Movement Correlation Coefficient", "topics": [ "Cr" ] }, { "page": "Cs", "title": "Coefficient of Sociality", "topics": [ "Cs" ] }, { "page": "dcPlot", "title": "Contact distance plot", "topics": [ "dcPlot" ] }, { "page": "deer", "title": "GPS tracking data of two male deer", "topics": [ "deer" ] }, { "page": "DI", "title": "Dynamic interaction index", "topics": [ "DI" ] }, { "page": "does", "title": "GPS tracking data of female white-tailed deer", "topics": [ "does" ] }, { "page": "Don", "title": "Doncaster's measure of dynamic interaction", "topics": [ "Don" ] }, { "page": "GetSimultaneous", "title": "Identify simultaneous fixes between trajectories", "topics": [ "GetSimultaneous" ] }, { "page": "GetTO", "title": "Get period where two tracks overlap", "topics": [ "GetTO" ] }, { "page": "HAI", "title": "Half-weight Association Index", "topics": [ "HAI" ] }, { "page": "IAB", "title": "Benhamou's IAB Index", "topics": [ "IAB" ] }, { "page": "Lixn", "title": "Minta's Spatial-temporal interaction statistics", "topics": [ "Lixn" ] }, { "page": "ltraj_move2", "title": "Convert ltraj to move2 object", "topics": [ "ltraj_move2" ] }, { "page": "move2_ltraj", "title": "Convert move2 to ltraj object", "topics": [ "move2_ltraj" ] }, { "page": "Prox", "title": "Proximity Index", "topics": [ "Prox" ] } ], "_readme": "https://github.com/jedalong/wildlifedi/raw/HEAD/README.md", "_rundeps": [ "ade4", "adehabitatLT", "adehabitatMA", "assertthat", "bit", "bit64", "class", "classInt", "cli", "cpp11", "crayon", "DBI", "dplyr", "e1071", "generics", "glue", "hms", "KernSmooth", "lattice", "lifecycle", "lwgeom", "magrittr", "MASS", "move2", "pillar", "pixmap", "pkgconfig", "prettyunits", "progress", "proxy", "R6", "Rcpp", "RcppArmadillo", "rlang", "s2", "sf", "sp", "tibble", "tidyselect", "tzdb", "units", "utf8", "vctrs", "vroom", "withr", "wk" ], "_vignettes": [ { "source": "wildlifeDI-vignette.rmd", "filename": "wildlifeDI-vignette.html", "title": "wildlifeDI: Analysis of Dynamic Interaction Patterns in Wildlife Tracking Data", "author": "Jed Long", "engine": "knitr::rmarkdown", "headings": [ "Introduction", "Some Terminology", "Data", "Checking for temporal overlap", "Static interaction analysis", "Obtaining Simultaneous Fixes - T$_{\\alpha\\beta}$", "Measuring Dynamic Interaction", "Global Analysis", "Prox - Proximity analysis", "Ca - Coefficient of association", "Don - Doncaster's non-parametric test of interaction", "Lixn - Test for spatial and temporal interaction", "Cs - Coefficient of sociality", "HAI - Half-weight association index", "IAB - Interaction Statistic", "Cr - Correlation coefficient", "DI - Dynamic interaction index", "Local Analysis", "Proximity Analysis", "IAB index", "Dynamic Interaction index", "Summary", "References" ], "created": "2019-04-12 19:48:49", "modified": "2024-02-10 22:18:44", "commits": 5 }, { "source": "wildlifeDI-vignette-contact_analysis.Rmd", "filename": "wildlifeDI-vignette-contact_analysis.html", "title": "wildlifeDI: Contact Analysis Workflow", "author": "Jed Long", "engine": "knitr::rmarkdown", "headings": [ "Background", "Set Up", "Libraries and Packages", "Contact Analysis - Doe Deer Data", "Processing contacts", "Mapping Contacts", "Derive the Contact Network", "Comparing contacts to non-contact fixes", "Summary", "Session Information" ], "created": "2021-01-27 19:57:51", "modified": "2024-03-22 19:03:06", "commits": 11 } ], "_score": 6.049992856920143, "_indexed": true, "_nocasepkg": "wildlifedi", "_universes": [ "jedalong" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.0.1", "date": "2026-05-16T06:37:27.000Z", "distro": "noble", "commit": "f9a1abde21d286cf2585cc57e83632ab239899d0", "fileid": "7d3955a11bbf82e643e95ac4150ec609baf4b6ceb64c75726b22ba3f8c896ebc", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/jedalong/actions/runs/25955027840" }, { "r": "4.6.0", "os": "linux", "version": "1.0.1", "date": "2026-05-16T06:37:12.000Z", "distro": "noble", "commit": "f9a1abde21d286cf2585cc57e83632ab239899d0", "fileid": "d1de18042c8b7a1b21f567065f8ab2cde61770ddfa1248e3df0cf85d824757eb", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/jedalong/actions/runs/25955027840" }, { "r": "4.5.3", "os": "mac", "version": "1.0.1", "date": "2026-05-16T06:41:06.000Z", "commit": "f9a1abde21d286cf2585cc57e83632ab239899d0", "fileid": "049cdf0fd75d2dca2654828db61403482288edd11c4fe19996c7c94d3919377f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/jedalong/actions/runs/25955027840" }, { "r": "4.6.0", "os": "mac", "version": "1.0.1", "date": "2026-05-16T06:38:49.000Z", "commit": "f9a1abde21d286cf2585cc57e83632ab239899d0", "fileid": "4adf866ec77afa61a390dfadcf69af66282a8c4d7eaf6d2de133ed06d28ec203", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/jedalong/actions/runs/25955027840" }, { "r": "4.7.0", "os": "win", "version": "1.0.1", "date": "2026-05-16T06:36:21.000Z", "commit": "f9a1abde21d286cf2585cc57e83632ab239899d0", "fileid": "f81c258472fb3233df76e690d52fbdf64978bbc158834d5a0d4a16a32ff135d5", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/jedalong/actions/runs/25955027840" }, { "r": "4.5.3", "os": "win", "version": "1.0.1", "date": "2026-05-16T06:36:06.000Z", "commit": "f9a1abde21d286cf2585cc57e83632ab239899d0", "fileid": "05f2075ee5f255a34d846877eb5895085cb38c0d7ff7d0cee05ce6560059b600", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/jedalong/actions/runs/25955027840" }, { "r": "4.6.0", "os": "win", "version": "1.0.1", "date": "2026-05-16T06:36:08.000Z", "commit": "f9a1abde21d286cf2585cc57e83632ab239899d0", "fileid": "8d8eb3867d9d52619ff45a9f352c1b2e9b58df2ce0776287763c23c3ceb6be5a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/jedalong/actions/runs/25955027840" }, { "r": "4.6.0", "os": "wasm", "version": "1.0.1", "date": "2026-06-02T18:43:44.000Z", "commit": "f9a1abde21d286cf2585cc57e83632ab239899d0", "fileid": "fc9a98203b0855af7f39cde36f765163b3f9ac73a5fd148eacb0824b486d207e", "status": "success", "buildurl": "https://github.com/r-universe/jedalong/actions/runs/25955027840" } ] }